I believe...
2
I'll do Angelina Jolie
Available: Research position Biological Data Visualization and Visual Analytics
Available: Research position Biological Data Visualization and Visual Analytics
Postdoc position available: visualization and genomic structural variation discovery
Postdoc position available: visualization and genomic structural variation discovery
Quantified Health, and my frustration with genetics
2
Clojure, visualization, and scripts
Biovis/Visweek recap
Humanizing Bioinformatics
4
Visualize This (by Nathan Yau) arrived...
Visualizing the Tour de France
TenderNoise - visualizing noise levels
Why did I move into data visualization?
VizBi 2011 - looking back
Open Research Computation - a new journal from BioMedCentral
Open Research Computation - a new journal from BioMedCentral
VCF, tab-delimited files and bioclojure
Postdoc position - Genomic variation discovery and visualization
Postdoc position - Genomic variation discovery and visualization
Encounter with incanter - about clojure, incanter and bioinformatics
Encounter with incanter - about clojure, incanter and bioinformatics
Threads in ruby: probably not how to use them
Threads in ruby: probably not how to use them
1
Tipping my toes in mongodb with ruby
Tipping my toes in mongodb with ruby
Trying out mapreduce - on the farm
Trying out mapreduce - on the farm
Trying out mapreduce
First test release of circular genome browser
LocusTree - searching genomic loci
2
The good and bad of genome viewers
4
Who-o-o are you? Who who? Who who?
5
To find structural variation, look at read pairs: introducing pARP
3
Visualize or summarize?
3
Data visualization
1
Using git to sync server with laptop
Using git to sync server with laptop
7
Bioruby with git: how would that work?
4
Would you want to contribute to a small open-source project?
Would you want to contribute to a small open-source project?
3
Keeping track of things: using a labbook for bioinformatics
4
Where did I get that data from?
Where did I get that data from?
4
Testing small scripts
Testing small scripts
Making Bio::Graphics extendable
Making Bio::Graphics extendable
3
What makes code beautiful?
What makes code beautiful?
3
Named arguments in ruby
Named arguments in ruby
7
The state of bioruby (or: how can bioruby grow?)
The state of bioruby (or: how can bioruby grow?)
3
Using rake to manage your software project
Using rake to manage your software project
5
Bio::Graphics and rails
Bio::Graphics and rails
2
Graphics, genomics and ruby
7
ActiveRecord - all vs all relationships
ActiveRecord - all vs all relationships
6
A ruby API to the Ensembl database
A ruby API to the Ensembl database
1
ActiveRecord and mysql: show my databases
ActiveRecord and mysql: show my databases
How do you process literature?
How do you process literature?
4
Documenting one-off parsers
Documenting one-off parsers
1
A choice of databases, or PostGres vs SQLite
A choice of databases, or PostGres vs SQLite
Bioinformatics and labbooks
Bioinformatics and labbooks
1
Six months of Getting Things Done
Naming conventions
Naming conventions
Manual genome annotation tools
2
Databases and ruby (without rails)
Databases and ruby (without rails)
4
Anatomy of data integration
Anatomy of data integration
Welcome
Welcome
Hi there, and welcome to SaaienTist, a blog by me, for me and you. It started out long ago as a personal notebook to help me remind how to do things, but evolved to cover more opinionated posts as well. After a hiatus of 3 to 4 years (basically since I started my current position in Belgium), I resurrect it to help me organize my thoughts. It might or might not be useful to you.

Why "Saaien tist"? Because it's pronounced as 'scientist', and means 'boring bloke' in Flemish.
About Me
About Me
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