Saaien Tist

Worked a couple of days on pARP, the circular genome browser, and I think it's ready to be tested out by others. Consider this an alpha release: expect a lot of issues. It's easy to create regions with a negative length, for example. Also, I didn't focus yet on user-friendliness or general input files. Ways of interaction are not made clear to new users yet and the input files still need to have fixed names and be stored in a particular folder.

pARP is designed to be a genome browser for features that are linked to other features on a genome (e.g. readpair mappings). Using a circular display, lines can be drawn connecting these features.

pARP always shows the whole genome. You can zoom into selected regions but the rest is still shown albeit squeezed a bit more together.